Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative histidine ammonia-lyase protein | JCM19237_5343 | Not Available | Positive | 306230 - 307399 | 43477.3 |
| 4-hydroxybenzoyl-coa thioesterase domain protein | JCM19237_5344 | Not Available | Positive | 307560 - 307997 | 16738.2 |
| putative transmembrane protein | JCM19237_5345 | Not Available | Positive | 308044 - 308430 | 14125.1 |
| putative transmembrane protein | JCM19237_5346 | Not Available | Positive | 308397 - 308687 | 10648.5 |
| membrane protein | JCM19237_5347 | Not Available | Positive | 308815 - 311031 | 79396.0 |
| membrane protein | JCM19237_5348 | Not Available | Positive | 311037 - 311246 | 7158.6 |
| hypothetical protein | JCM19237_5349 | Not Available | Positive | 311243 - 311488 | 8488.03 |
| hypothetical protein | JCM19237_5350 | Not Available | Positive | 311533 - 311928 | 14164.9 |
| hypothetical protein | JCM19237_5351 | Not Available | Positive | 311970 - 312086 | 4406.33 |
| 3-oxoacyl-[acp] synthase fabv like | JCM19237_5352 | Not Available | Positive | 312101 - 312664 | 20198.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
