Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein i | JCM19237_2730 | Not Available | Positive | 3581720 - 3582949 | 44393.7 |
| methyl-accepting chemotaxis protein i | JCM19237_2731 | Not Available | Positive | 3582946 - 3583095 | 5514.54 |
| transcriptional regulator lysr family | JCM19237_2732 | Not Available | Positive | 3583211 - 3584131 | 35120.9 |
| nucleoside permease nupc | JCM19237_2733 | Not Available | Positive | 3584419 - 3585003 | 20917.1 |
| na+ dependent nucleoside transporter nupc | JCM19237_2734 | Not Available | Positive | 3585018 - 3585596 | 20091.8 |
| hypothetical protein | JCM19237_2735 | Not Available | Positive | 3585885 - 3586163 | 10554.9 |
| endo-beta-1,3-1,4 glucanase | JCM19237_2736 | Not Available | Negative | 3586241 - 3587257 | 38303.9 |
| hypothetical protein | JCM19237_2737 | Not Available | Negative | 3587393 - 3587647 | 9474.45 |
| hypothetical protein | JCM19237_2738 | Not Available | Negative | 3587733 - 3588818 | 41161.6 |
| response regulator/ggdef domain protein | JCM19237_2739 | Not Available | Positive | 3589496 - 3590902 | 54299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
