Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantoate-beta-alanine ligaseJCM19237_2630Not AvailableNegative3508190 - 350866617387.0
pantoate-beta-alanine ligaseJCM19237_2631Not AvailableNegative3508663 - 350906114735.8
3-methyl-2-oxobutanoate hydroxymethyltransferaseJCM19237_2632Not AvailableNegative3509157 - 350992427442.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseJCM19237_2633Not AvailableNegative3509978 - 35101245446.69
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseJCM19237_2634Not AvailableNegative3510127 - 351046211897.1
poly(a) polymeraseJCM19237_2635Not AvailableNegative3510459 - 351088416807.0
poly(a) polymeraseJCM19237_2636Not AvailableNegative3510878 - 351178634871.8
glutamyl-q-trna synthetaseJCM19237_2637Not AvailableNegative3511935 - 351281932397.5
c4-type zinc finger protein dksa/trar familyJCM19237_2638Not AvailableNegative3513097 - 35132556143.02
sugar/maltose fermentation stimulation protein homologJCM19237_2639Not AvailableNegative3513478 - 351418226020.0

Displaying genes 4571 – 4580 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.