Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron abc transporter permease protein | JCM19237_2620 | Not Available | Positive | 3501272 - 3502447 | 43904.3 |
| ferric iron abc transporter permease protein | JCM19237_2621 | Not Available | Positive | 3502447 - 3502926 | 17541.1 |
| ferric iron abc transporter atp-binding protein | JCM19237_2622 | Not Available | Positive | 3502926 - 3503567 | 23602.8 |
| ferric iron abc transporter atp-binding protein | JCM19237_2623 | Not Available | Positive | 3503564 - 3503980 | 15073.7 |
| quorum-sensing regulator of virulence hapr | JCM19237_2624 | Not Available | Negative | 3504085 - 3504615 | 20335.1 |
| hypoxanthine-guanine phosphoribosyltransferase | JCM19237_2625 | Not Available | Positive | 3504899 - 3505432 | 20002.2 |
| carbonic anhydrase | JCM19237_2626 | Not Available | Negative | 3505543 - 3506232 | 25800.9 |
| abc-type multidrug transport system atpase component | JCM19237_2627 | Not Available | Positive | 3506423 - 3507244 | 30762.5 |
| hypothetical protein | JCM19237_2628 | Not Available | Positive | 3507241 - 3507426 | 6613.57 |
| abc-type multidrug transport system permease component | JCM19237_2629 | Not Available | Positive | 3507423 - 3508193 | 27838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
