Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | JCM19237_2580 | Not Available | Negative | 3469826 - 3470599 | 28708.4 |
| leader peptidase | JCM19237_2581 | Not Available | Negative | 3470636 - 3471487 | 31118.5 |
| type iv fimbrial assembly protein pilc | JCM19237_2582 | Not Available | Negative | 3471608 - 3471814 | 7330.25 |
| type iv fimbrial assembly protein pilc | JCM19237_2583 | Not Available | Negative | 3471840 - 3472751 | 33445.2 |
| type iv fimbrial assembly atpase pilb | JCM19237_2584 | Not Available | Negative | 3472930 - 3473103 | 6183.61 |
| type iv fimbrial assembly atpase pilb | JCM19237_2585 | Not Available | Negative | 3473103 - 3474041 | 34422.7 |
| type iv fimbrial assembly atpase pilb | JCM19237_2586 | Not Available | Negative | 3474149 - 3474625 | 17292.7 |
| type iv pilin pila | JCM19237_2587 | Not Available | Negative | 3474625 - 3475086 | 15370.4 |
| hypothetical protein | JCM19237_2588 | Not Available | Negative | 3475233 - 3475358 | 4652.49 |
| quinolinate phosphoribosyltransferase | JCM19237_2589 | Not Available | Negative | 3475455 - 3476360 | 32659.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
