Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized abc transporter permease component yrbe | JCM19237_2520 | Not Available | Positive | 3428822 - 3428977 | 5575.15 |
| uncharacterized abc transporter permease component yrbe | JCM19237_2521 | Not Available | Positive | 3428986 - 3429486 | 17725.0 |
| uncharacterized abc transporter periplasmic component yrbd | JCM19237_2522 | Not Available | Positive | 3429559 - 3430035 | 17059.7 |
| uncharacterized abc transporter auxiliary component yrbc | JCM19237_2523 | Not Available | Positive | 3430048 - 3430695 | 24347.4 |
| yrba protein | JCM19237_2524 | Not Available | Positive | 3431019 - 3431276 | 9492.56 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | JCM19237_2525 | Not Available | Positive | 3431287 - 3432543 | 44345.5 |
| outer membrane stress sensor protease degs | JCM19237_2526 | Not Available | Negative | 3432701 - 3432916 | 7665.31 |
| outer membrane stress sensor protease degs | JCM19237_2527 | Not Available | Negative | 3432919 - 3433509 | 21120.2 |
| outer membrane stress sensor protease degs | JCM19237_2528 | Not Available | Negative | 3433502 - 3433768 | 10089.2 |
| outer membrane stress sensor protease degq | JCM19237_2529 | Not Available | Negative | 3433965 - 3434168 | 7452.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
