Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter atp-binding protein lptb | JCM19237_2510 | Not Available | Negative | 3423299 - 3423871 | 20898.4 |
| lpta protein | JCM19237_2511 | Not Available | Negative | 3423884 - 3424381 | 18470.1 |
| uncharacterized protein yrbk | JCM19237_2512 | Not Available | Negative | 3424368 - 3424925 | 20948.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | JCM19237_2513 | Not Available | Negative | 3424922 - 3425092 | 6095.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | JCM19237_2514 | Not Available | Negative | 3425107 - 3425472 | 13178.0 |
| arabinose 5-phosphate isomerase | JCM19237_2515 | Not Available | Negative | 3425472 - 3425924 | 16426.1 |
| arabinose 5-phosphate isomerase | JCM19237_2516 | Not Available | Negative | 3425924 - 3426442 | 17910.0 |
| inner membrane protein yrbg | JCM19237_2517 | Not Available | Negative | 3426457 - 3427422 | 33697.4 |
| uncharacterized abc transporter atp-binding protein yrbf | JCM19237_2518 | Not Available | Positive | 3427857 - 3428702 | 30874.6 |
| hypothetical protein | JCM19237_2519 | Not Available | Positive | 3428706 - 3428837 | 4925.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
