Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlde protein | JCM19237_2500 | Not Available | Positive | 3417239 - 3417877 | 23216.1 |
| mg/co/ni transporter mgte / cbs domain | JCM19237_2501 | Not Available | Negative | 3417998 - 3418930 | 33123.7 |
| magnesium transporter | JCM19237_2502 | Not Available | Negative | 3418927 - 3419355 | 16101.0 |
| phosphocarrier protein | JCM19237_2503 | Not Available | Negative | 3419648 - 3419923 | 9665.47 |
| hypothetical atp-binding protein upf0042 | JCM19237_2504 | Not Available | Negative | 3419892 - 3420770 | 33309.0 |
| pts system nitrogen-specific iia component | JCM19237_2505 | Not Available | Negative | 3420811 - 3421188 | 13929.8 |
| ribosome hibernation protein yhbh | JCM19237_2506 | Not Available | Negative | 3421296 - 3421550 | 9710.53 |
| rna polymerase sigma-54 factor rpon | JCM19237_2507 | Not Available | Negative | 3421577 - 3422686 | 41738.9 |
| rna polymerase sigma-54 factor rpon | JCM19237_2508 | Not Available | Negative | 3422873 - 3423043 | 6383.98 |
| lipopolysaccharide abc transporter atp-binding protein lptb | JCM19237_2509 | Not Available | Negative | 3423144 - 3423305 | 5940.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
