Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-pyruvate aminotransferase | JCM19237_2450 | Not Available | Positive | 3377165 - 3377491 | 11980.6 |
| lipid a core-o-antigen ligase | JCM19237_2451 | Not Available | Negative | 3377573 - 3378169 | 23224.1 |
| lipid a core-o-antigen ligase | JCM19237_2452 | Not Available | Negative | 3378172 - 3378417 | 8704.57 |
| lipid a core-o-antigen ligase | JCM19237_2453 | Not Available | Negative | 3378408 - 3378911 | 18698.3 |
| lipid a core-o-antigen ligase | JCM19237_2454 | Not Available | Negative | 3378908 - 3379327 | 15410.2 |
| excinuclease abc subunit a | JCM19237_2455 | Not Available | Negative | 3379428 - 3382271 | 104227.0 |
| single-stranded dna-binding protein | JCM19237_2456 | Not Available | Positive | 3382552 - 3383109 | 20422.7 |
| predicted manganese transporter 11 tms | JCM19237_2457 | Not Available | Negative | 3383363 - 3384565 | 42384.4 |
| transcriptional regulator lysr family | JCM19237_2458 | Not Available | Negative | 3384692 - 3384895 | 7561.2 |
| transcriptional regulator lysr family | JCM19237_2459 | Not Available | Negative | 3384865 - 3385638 | 29090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
