Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-reactive ni/fe-hydrogenase small chain precursor | JCM19237_1918 | Not Available | Negative | 3316362 - 3316826 | 17075.1 |
| [nife] hydrogenase nickel incorporation protein hypa | JCM19237_1919 | Not Available | Negative | 3316959 - 3317177 | 8285.12 |
| hypothetical protein | JCM19237_1920 | Not Available | Negative | 3317158 - 3317301 | 5286.24 |
| [nife] hydrogenase metallocenter assembly protein hype | JCM19237_1921 | Not Available | Negative | 3317301 - 3317618 | 11099.6 |
| [nife] hydrogenase metallocenter assembly protein hype | JCM19237_1922 | Not Available | Negative | 3317817 - 3318302 | 17152.8 |
| [nife] hydrogenase metallocenter assembly protein hypd | JCM19237_1923 | Not Available | Negative | 3318343 - 3318753 | 15163.0 |
| [nife] hydrogenase metallocenter assembly protein hypd | JCM19237_1924 | Not Available | Negative | 3318776 - 3319237 | 16705.4 |
| [nife] hydrogenase metallocenter assembly protein hypd | JCM19237_1925 | Not Available | Negative | 3319237 - 3319407 | 6284.89 |
| [nife] hydrogenase metallocenter assembly protein hypc | JCM19237_1926 | Not Available | Negative | 3319461 - 3319715 | 9280.33 |
| [nife] hydrogenase nickel incorporation-associated protein hypb | JCM19237_1927 | Not Available | Negative | 3319726 - 3320262 | 19567.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
