Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[nife] hydrogenase metallocenter assembly protein hypfJCM19237_1908Not AvailableNegative3308322 - 33084895955.18
[nife] hydrogenase metallocenter assembly protein hypfJCM19237_1909Not AvailableNegative3308506 - 331089385852.8
protein hydeJCM19237_1910Not AvailableNegative3310941 - 331124010854.2
protein hydeJCM19237_1911Not AvailableNegative3311249 - 331250846356.3
hydrogenase maturation proteaseJCM19237_1912Not AvailableNegative3312715 - 331328720870.2
quinone-reactive ni/fe hydrogenase cytochrome b subunitJCM19237_1913Not AvailableNegative3313284 - 331396725990.9
quinone-reactive ni/fe-hydrogenase large chainJCM19237_1914Not AvailableNegative3313978 - 331490133738.0
quinone-reactive ni/fe-hydrogenase large chainJCM19237_1915Not AvailableNegative3314853 - 331521213586.3
quinone-reactive ni/fe-hydrogenase large chainJCM19237_1916Not AvailableNegative3315209 - 331567917902.1
quinone-reactive ni/fe-hydrogenase small chain precursorJCM19237_1917Not AvailableNegative3315676 - 331639225120.6

Displaying genes 4291 – 4300 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.