Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_1898 | Not Available | Positive | 3302568 - 3302849 | 9979.01 |
| hypothetical protein | JCM19237_1899 | Not Available | Positive | 3302842 - 3303354 | 18471.4 |
| dipeptide transport atp-binding protein dppf | JCM19237_1900 | Not Available | Negative | 3303400 - 3303600 | 7567.38 |
| dipeptide transport atp-binding protein dppf | JCM19237_1901 | Not Available | Negative | 3303648 - 3304043 | 14479.3 |
| dipeptide transport atp-binding protein dppd | JCM19237_1902 | Not Available | Negative | 3304037 - 3304264 | 8812.75 |
| hypothetical protein | JCM19237_1903 | Not Available | Negative | 3304281 - 3304571 | 10319.3 |
| hypothetical protein | JCM19237_1904 | Not Available | Positive | 3304587 - 3304730 | 5148.96 |
| dipeptide transport system permease protein dppc | JCM19237_1905 | Not Available | Negative | 3304862 - 3305713 | 30366.9 |
| dipeptide transport system permease protein dppb | JCM19237_1906 | Not Available | Negative | 3305730 - 3306635 | 33691.9 |
| nickel abc transporter periplasmic nickel-binding protein nika2 | JCM19237_1907 | Not Available | Negative | 3306671 - 3308290 | 59360.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
