Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminobutyrate-pyruvate aminotransferase | JCM19237_1888 | Not Available | Negative | 3296152 - 3296883 | 27090.3 |
| hypothetical protein | JCM19237_1889 | Not Available | Negative | 3296895 - 3297068 | 6548.52 |
| n-acetyl-l,l-diaminopimelate deacetylase | JCM19237_1890 | Not Available | Negative | 3297065 - 3298114 | 36934.8 |
| hypothetical protein | JCM19237_1891 | Not Available | Negative | 3298111 - 3298230 | 4251.14 |
| endo alpha-1,4 polygalactosaminidase precusor precursor | JCM19237_1892 | Not Available | Negative | 3298587 - 3298799 | 8260.75 |
| endo alpha-1,4 polygalactosaminidase precusor precursor | JCM19237_1893 | Not Available | Negative | 3298796 - 3299002 | 7518.68 |
| endo alpha-1,4 polygalactosaminidase precusor precursor | JCM19237_1894 | Not Available | Negative | 3298980 - 3299405 | 15590.0 |
| antibiotic biosynthesis monooxygenase | JCM19237_1895 | Not Available | Negative | 3299578 - 3299922 | 12886.3 |
| hypothetical protein | JCM19237_1896 | Not Available | Negative | 3300050 - 3300619 | 21240.7 |
| transcriptional regulator lysr family | JCM19237_1897 | Not Available | Positive | 3301455 - 3302348 | 33983.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
