Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel hsp60 family | JCM19237_1868 | Not Available | Positive | 3278871 - 3280247 | 50120.2 |
| duf324 domain-containing protein | JCM19237_1869 | Not Available | Positive | 3280350 - 3281852 | 55668.9 |
| hypothetical protein | JCM19237_1870 | Not Available | Positive | 3281849 - 3283429 | 59573.2 |
| hypothetical protein | JCM19237_1871 | Not Available | Positive | 3283517 - 3284245 | 26826.8 |
| hypothetical protein | JCM19237_1872 | Not Available | Positive | 3284330 - 3284797 | 17744.0 |
| hypothetical protein | JCM19237_1873 | Not Available | Positive | 3284781 - 3285086 | 11508.5 |
| retron-type rna-directed dna polymerase | JCM19237_1874 | Not Available | Positive | 3285385 - 3286083 | 26166.3 |
| crispr-associated protein cas1 | JCM19237_1875 | Not Available | Positive | 3286203 - 3286856 | 25042.2 |
| hypothetical protein | JCM19237_1876 | Not Available | Positive | 3286871 - 3287125 | 9696.94 |
| crispr-associated protein cas2 | JCM19237_1877 | Not Available | Positive | 3287160 - 3287438 | 11069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
