Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconate kinase | JCM19237_1838 | Not Available | Negative | 3253080 - 3253373 | 10598.7 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | JCM19237_1839 | Not Available | Positive | 3253527 - 3253784 | 10147.3 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | JCM19237_1840 | Not Available | Positive | 3253751 - 3254413 | 24638.5 |
| inner membrane protein ygjv | JCM19237_1841 | Not Available | Positive | 3254607 - 3255140 | 19338.3 |
| hypothetical protein | JCM19237_1842 | Not Available | Positive | 3255660 - 3255830 | 6499.64 |
| proton/glutamate symport protein | JCM19237_1843 | Not Available | Negative | 3255957 - 3257240 | 44979.9 |
| nadh dehydrogenase | JCM19237_1844 | Not Available | Negative | 3257362 - 3258594 | 44703.9 |
| hypothetical protein | JCM19237_1845 | Not Available | Negative | 3258848 - 3259069 | 8095.31 |
| hypothetical protein | JCM19237_1846 | Not Available | Positive | 3259474 - 3259683 | 7374.94 |
| chitinase | JCM19237_1847 | Not Available | Positive | 3259893 - 3261275 | 51915.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
