Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | JCM19237_1828 | Not Available | Negative | 3243965 - 3245488 | 58374.7 |
| hypothetical protein | JCM19237_1829 | Not Available | Negative | 3245499 - 3245663 | 6228.37 |
| hypothetical protein | JCM19237_1830 | Not Available | Negative | 3245663 - 3246721 | 40065.4 |
| 2-deoxy-d-gluconate 3-dehydrogenase | JCM19237_1831 | Not Available | Negative | 3246919 - 3247413 | 17612.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | JCM19237_1832 | Not Available | Negative | 3247413 - 3247637 | 7650.19 |
| galactose-1-phosphate uridylyltransferase | JCM19237_1833 | Not Available | Negative | 3247802 - 3248860 | 40587.8 |
| udp-glucose 4-epimerase | JCM19237_1834 | Not Available | Negative | 3248902 - 3249918 | 37045.0 |
| sulfate permease | JCM19237_1835 | Not Available | Negative | 3249919 - 3251595 | 59770.3 |
| 4-hydroxy-2-oxoglutarate aldolase | JCM19237_1836 | Not Available | Negative | 3251750 - 3252382 | 22147.0 |
| 2-dehydro-3-deoxygluconate kinase | JCM19237_1837 | Not Available | Negative | 3252403 - 3253089 | 24929.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
