Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system permease protein oppb | JCM19237_1818 | Not Available | Negative | 3232345 - 3233928 | 58812.2 |
| hypothetical protein | JCM19237_1819 | Not Available | Negative | 3233955 - 3234074 | 4236.09 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | JCM19237_1820 | Not Available | Negative | 3234236 - 3234589 | 13460.8 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | JCM19237_1821 | Not Available | Negative | 3234580 - 3235218 | 24346.7 |
| oligopeptide transport system permease protein oppb | JCM19237_1822 | Not Available | Negative | 3235231 - 3235434 | 7132.28 |
| oligopeptide transport system permease protein oppb | JCM19237_1823 | Not Available | Negative | 3235407 - 3236288 | 32499.2 |
| oligopeptide abc transporter | JCM19237_1824 | Not Available | Negative | 3236368 - 3238218 | 69559.2 |
| hypothetical/partial homology | JCM19237_1825 | Not Available | Negative | 3238359 - 3240095 | 64950.4 |
| putative arylsulfatase regulatory protein | JCM19237_1826 | Not Available | Negative | 3240225 - 3241622 | 52315.0 |
| lacto-n-biose phosphorylase | JCM19237_1827 | Not Available | Negative | 3241783 - 3243963 | 82261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
