Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv fimbrial biogenesis protein fimt | JCM19237_1764 | Not Available | Positive | 3193970 - 3194116 | 5275.53 |
| type iv fimbrial biogenesis protein fimt | JCM19237_1765 | Not Available | Positive | 3194113 - 3194484 | 13665.2 |
| type iv fimbrial biogenesis protein pilw | JCM19237_1766 | Not Available | Positive | 3194513 - 3195094 | 20460.3 |
| hypothetical protein | JCM19237_1767 | Not Available | Positive | 3195094 - 3196359 | 45303.4 |
| type iv fimbrial biogenesis protein pilv | JCM19237_1768 | Not Available | Positive | 3196396 - 3196761 | 13203.8 |
| Trna-ser | Not Available | Not Available | Positive | 3196852 - 3196942 | Not Available |
| mannose-6-phosphate isomerase | JCM19237_1774 | Not Available | Negative | 3197069 - 3197854 | 28228.7 |
| mannose-6-phosphate isomerase | JCM19237_1775 | Not Available | Negative | 3197842 - 3198273 | 15502.6 |
| pts system fructose-specific iia /iib / iic component | JCM19237_1776 | Not Available | Negative | 3198608 - 3200041 | 48633.4 |
| pts system fructose-specific iia /iib / iic component | JCM19237_1777 | Not Available | Negative | 3200020 - 3200505 | 17973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
