Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein smpa | JCM19237_1754 | Not Available | Negative | 3185872 - 3186228 | 13660.3 |
| dna repair protein recn | JCM19237_1755 | Not Available | Negative | 3186371 - 3186892 | 18402.3 |
| dna repair protein recn | JCM19237_1756 | Not Available | Negative | 3186880 - 3188037 | 43742.9 |
| nad kinase | JCM19237_1757 | Not Available | Negative | 3188210 - 3189097 | 32534.0 |
| heat shock protein grpe | JCM19237_1758 | Not Available | Positive | 3189297 - 3189905 | 22514.7 |
| chaperone protein dnak | JCM19237_1759 | Not Available | Positive | 3190113 - 3190742 | 22676.3 |
| chaperone protein dnak | JCM19237_1760 | Not Available | Positive | 3190817 - 3192046 | 44103.3 |
| chaperone protein dnaj | JCM19237_1761 | Not Available | Positive | 3192204 - 3192929 | 26121.2 |
| chaperone protein dnaj | JCM19237_1762 | Not Available | Positive | 3192938 - 3193252 | 11189.6 |
| type iv pilus biogenesis protein pile | JCM19237_1763 | Not Available | Negative | 3193348 - 3193764 | 14695.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
