Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sll8002 protein | JCM19237_1745 | Not Available | Positive | 3179150 - 3179710 | 21342.3 |
| adp-ribose 1-phosphate phophatase related | JCM19237_1746 | Not Available | Positive | 3179724 - 3179948 | 8223.06 |
| adp-ribose 1-phosphate phophatase related | JCM19237_1747 | Not Available | Positive | 3179900 - 3180763 | 32495.2 |
| hypothetical protein | JCM19237_1748 | Not Available | Positive | 3181560 - 3182438 | 33702.0 |
| mobile element protein | JCM19237_1749 | Not Available | Negative | 3182435 - 3183547 | 42149.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3183838 - 3184205 | Not Available |
| tmrna-binding protein smpb | JCM19237_1750 | Not Available | Negative | 3184313 - 3184795 | 18053.9 |
| putative oligoketide cyclase/lipid transport protein | JCM19237_1751 | Not Available | Positive | 3184999 - 3185187 | 6708.27 |
| putative oligoketide cyclase/lipid transport protein | JCM19237_1752 | Not Available | Positive | 3185223 - 3185432 | 7955.63 |
| upf0125 protein yfjf | JCM19237_1753 | Not Available | Positive | 3185407 - 3185727 | 12221.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
