Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | JCM19237_1695 | Not Available | Positive | 3137259 - 3138626 | 51138.1 |
| glycogen debranching enzyme | JCM19237_1696 | Not Available | Positive | 3138863 - 3139879 | 37667.4 |
| glycogen debranching enzyme | JCM19237_1697 | Not Available | Positive | 3139876 - 3140991 | 42358.8 |
| hypothetical protein | JCM19237_1698 | Not Available | Positive | 3141120 - 3141254 | 4785.29 |
| putative deoxyribonuclease yjjv | JCM19237_1699 | Not Available | Positive | 3141244 - 3141555 | 11050.0 |
| putative deoxyribonuclease yjjv | JCM19237_1700 | Not Available | Positive | 3141546 - 3141953 | 14784.0 |
| nucleoside permease nupc | JCM19237_1701 | Not Available | Positive | 3142253 - 3143545 | 44321.1 |
| deoxyribose-phosphate aldolase | JCM19237_1702 | Not Available | Positive | 3144605 - 3145321 | 25634.8 |
| thymidine phosphorylase | JCM19237_1703 | Not Available | Positive | 3145570 - 3146901 | 46969.3 |
| phosphopentomutase | JCM19237_1704 | Not Available | Positive | 3146913 - 3148133 | 43798.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
