Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease | JCM19237_1685 | Not Available | Negative | 3131675 - 3132184 | 18583.3 |
| putative protease | JCM19237_1686 | Not Available | Negative | 3132199 - 3132429 | 8318.95 |
| diguanylate cyclase | JCM19237_1687 | Not Available | Negative | 3132588 - 3133175 | 21956.5 |
| diguanylate cyclase | JCM19237_1688 | Not Available | Negative | 3133172 - 3133516 | 12951.4 |
| diguanylate cyclase | JCM19237_1689 | Not Available | Negative | 3133555 - 3134619 | 39713.4 |
| putative lipid carrier protein | JCM19237_1690 | Not Available | Positive | 3134824 - 3135345 | 19907.9 |
| acetyltransferase | JCM19237_1691 | Not Available | Positive | 3135335 - 3135838 | 18416.1 |
| dna polymerase iii psi subunit | JCM19237_1692 | Not Available | Positive | 3135986 - 3136387 | 15295.5 |
| ribosomal-protein-s18p-alanine acetyltransferase | JCM19237_1693 | Not Available | Positive | 3136377 - 3136943 | 21563.0 |
| peptide chain release factor 3 | JCM19237_1694 | Not Available | Positive | 3137047 - 3137259 | 7828.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
