Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor 2 | JCM19237_1675 | Not Available | Positive | 3124318 - 3124860 | 19822.8 |
| ribosome-binding factor a | JCM19237_1676 | Not Available | Positive | 3124957 - 3125355 | 15193.1 |
| trna pseudouridine synthase b | JCM19237_1677 | Not Available | Positive | 3125359 - 3125928 | 21204.8 |
| trna pseudouridine synthase b | JCM19237_1678 | Not Available | Positive | 3125943 - 3126305 | 13013.7 |
| hypothetical protein | JCM19237_1679 | Not Available | Negative | 3126399 - 3126530 | 4988.21 |
| ssu ribosomal protein s15p | JCM19237_1680 | Not Available | Positive | 3126731 - 3127000 | 10183.3 |
| polyribonucleotide nucleotidyltransferase | JCM19237_1681 | Not Available | Positive | 3127242 - 3129365 | 76692.9 |
| lipoprotein nlpi precursor | JCM19237_1682 | Not Available | Positive | 3129494 - 3130417 | 35650.1 |
| putative protease | JCM19237_1683 | Not Available | Negative | 3130548 - 3131426 | 32778.1 |
| putative protease | JCM19237_1684 | Not Available | Negative | 3131436 - 3131627 | 7227.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
