Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl-trna synthetase class ii | JCM19237_1617 | Not Available | Positive | 3077400 - 3078908 | 57206.2 |
| transcriptional regulator vpsr | JCM19237_1618 | Not Available | Positive | 3079244 - 3080137 | 32980.1 |
| transcriptional regulator vpsr | JCM19237_1619 | Not Available | Positive | 3080179 - 3080568 | 14723.9 |
| hypothetical protein | JCM19237_1620 | Not Available | Positive | 3080927 - 3081178 | 10023.2 |
| oxidoreductase aldo/keto reductase family | JCM19237_1621 | Not Available | Negative | 3081304 - 3082338 | 38278.5 |
| hypothetical protein | JCM19237_1622 | Not Available | Positive | 3082503 - 3082805 | 11507.7 |
| dna mismatch repair endonuclease muth | JCM19237_1623 | Not Available | Negative | 3082815 - 3083453 | 23526.6 |
| adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase | JCM19237_1624 | Not Available | Positive | 3084259 - 3084810 | 21727.0 |
| phosphoenolpyruvate-protein phosphotransferase | JCM19237_1625 | Not Available | Positive | 3085175 - 3087058 | 69977.3 |
| protein of unknown function duf81 | JCM19237_1626 | Not Available | Positive | 3087089 - 3087382 | 9894.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
