Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (adenine37-n(6))-methyltransferase trmn6JCM19237_1607Not AvailableNegative3069107 - 306943911802.7
trna (adenine37-n(6))-methyltransferase trmn6JCM19237_1608Not AvailableNegative3069415 - 30695705254.41
branched-chain amino acid transport system carrier proteinJCM19237_1609Not AvailablePositive3070142 - 307145846338.1
flavodoxin 2JCM19237_1610Not AvailableNegative3071557 - 30717908804.19
tyrosine recombinase xerdJCM19237_1611Not AvailablePositive3072327 - 307322334535.7
thiol:disulfide interchange protein dsbcJCM19237_1612Not AvailablePositive3073440 - 307416226188.6
single-stranded-dna-specific exonuclease recjJCM19237_1613Not AvailablePositive3074348 - 307468912567.5
single-stranded-dna-specific exonuclease recjJCM19237_1614Not AvailablePositive3074701 - 307518617244.8
single-stranded-dna-specific exonuclease recjJCM19237_1615Not AvailablePositive3075138 - 307607034414.7
peptide chain release factor 2JCM19237_1616Not AvailablePositive3076305 - 307736639698.1

Displaying genes 3991 – 4000 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.