Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iv | JCM19237_1597 | Not Available | Positive | 3061878 - 3062219 | 12460.0 |
| endonuclease iv | JCM19237_1598 | Not Available | Positive | 3062243 - 3062722 | 17770.1 |
| uracil-dna glycosylase family 1 | JCM19237_1599 | Not Available | Positive | 3062791 - 3063471 | 25023.7 |
| hypothetical protein | JCM19237_1600 | Not Available | Positive | 3063604 - 3064134 | 20775.3 |
| hypothetical protein | JCM19237_1601 | Not Available | Negative | 3064223 - 3064405 | 7137.27 |
| sodium/alanine symporter | JCM19237_1602 | Not Available | Positive | 3065008 - 3066423 | 50877.7 |
| upf0246 protein yaaa | JCM19237_1603 | Not Available | Positive | 3066556 - 3067059 | 18774.6 |
| upf0246 protein yaaa | JCM19237_1604 | Not Available | Positive | 3067053 - 3067331 | 10335.6 |
| atp-dependent rna helicase srmb | JCM19237_1605 | Not Available | Negative | 3067440 - 3068660 | 45955.0 |
| trna (adenine37-n(6))-methyltransferase trmn6 | JCM19237_1606 | Not Available | Negative | 3068868 - 3069131 | 9171.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
