Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase phosphatase/kinase | JCM19237_1587 | Not Available | Negative | 3052648 - 3054231 | 61558.5 |
| isocitrate dehydrogenase phosphatase/kinase | JCM19237_1588 | Not Available | Negative | 3054228 - 3054410 | 6813.09 |
| aspartokinase | JCM19237_1589 | Not Available | Positive | 3054930 - 3055466 | 18791.7 |
| aspartokinase | JCM19237_1590 | Not Available | Positive | 3055487 - 3057388 | 68173.8 |
| homoserine kinase | JCM19237_1591 | Not Available | Positive | 3057390 - 3058082 | 25089.2 |
| homoserine kinase | JCM19237_1592 | Not Available | Positive | 3058079 - 3058327 | 9059.75 |
| threonine synthase | JCM19237_1593 | Not Available | Positive | 3058347 - 3058481 | 5061.3 |
| threonine synthase | JCM19237_1594 | Not Available | Positive | 3058561 - 3058887 | 11522.8 |
| proton/glutamate symport protein | JCM19237_1595 | Not Available | Negative | 3059561 - 3060910 | 47840.6 |
| pyruvate formate-lyase | JCM19237_1596 | Not Available | Negative | 3061140 - 3061517 | 13784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
