Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-n-acetylhexosaminidaseJCM19237_1527Not AvailableNegative3005182 - 300565217229.2
glucosamine kinase gpskJCM19237_1528Not AvailableNegative3005636 - 300654732150.6
glucosamine-link cellobiaseJCM19237_1529Not AvailableNegative3006540 - 300827365073.4
(glcnac)2 abc transporter atp-binding component 2JCM19237_1530Not AvailableNegative3008322 - 300927835603.4
(glcnac)2 abc transporter atp-binding component 1JCM19237_1531Not AvailableNegative3009300 - 301027136058.8
(glcnac)2 abc transporter permease component 2JCM19237_1532Not AvailableNegative3010231 - 301068316517.2
(glcnac)2 abc transporter permease component 2JCM19237_1533Not AvailableNegative3010767 - 301132720134.6
(glcnac)2 abc transporter permease component 1JCM19237_1534Not AvailableNegative3011433 - 301219727757.4
(glcnac)2 abc transporter periplasmic substrate-binding proteinJCM19237_1535Not AvailableNegative3012421 - 301410062926.3
chitin catabolic cascade sensor histidine kinase chisJCM19237_1536Not AvailableNegative3014724 - 301501111418.7

Displaying genes 3911 – 3920 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.