Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | JCM19237_4931 | Not Available | Positive | 2984334 - 2985413 | 38742.0 |
| damx protein | JCM19237_4932 | Not Available | Positive | 2985429 - 2985956 | 20036.1 |
| hypothetical protein | JCM19237_4933 | Not Available | Positive | 2985953 - 2986075 | 4301.1 |
| damx protein | JCM19237_4934 | Not Available | Positive | 2986105 - 2986503 | 13889.5 |
| damx protein | JCM19237_4935 | Not Available | Positive | 2986615 - 2986986 | 13657.2 |
| methyl-directed repair dna adenine methylase | JCM19237_4936 | Not Available | Positive | 2987093 - 2987917 | 31372.2 |
| hypothetical protein | JCM19237_4937 | Not Available | Negative | 2988050 - 2988214 | 6036.43 |
| ribulose-phosphate 3-epimerase | JCM19237_4938 | Not Available | Positive | 2988445 - 2989119 | 24518.8 |
| phosphoglycolate phosphatase | JCM19237_4939 | Not Available | Positive | 2989121 - 2989810 | 24949.8 |
| tryptophanyl-trna synthetase | JCM19237_4940 | Not Available | Positive | 2989945 - 2990115 | 6281.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
