Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multimodular transpeptidase-transglycosylase | JCM19237_4921 | Not Available | Negative | 2976360 - 2976701 | 12746.6 |
| multimodular transpeptidase-transglycosylase | JCM19237_4922 | Not Available | Negative | 2976797 - 2978794 | 72880.0 |
| type iv pilus biogenesis protein pilm | JCM19237_4923 | Not Available | Positive | 2979048 - 2980064 | 37030.4 |
| type iv pilus biogenesis protein piln | JCM19237_4924 | Not Available | Positive | 2980061 - 2980369 | 11793.6 |
| hypothetical protein | JCM19237_4925 | Not Available | Positive | 2980506 - 2980700 | 6875.08 |
| type iv pilus biogenesis protein pilo | JCM19237_4926 | Not Available | Positive | 2980690 - 2981388 | 26551.7 |
| hypothetical protein | JCM19237_4927 | Not Available | Positive | 2981369 - 2981488 | 4134.71 |
| type iv pilus biogenesis protein pilp | JCM19237_4928 | Not Available | Positive | 2981542 - 2981856 | 11668.3 |
| type iv pilus biogenesis protein pilq | JCM19237_4929 | Not Available | Positive | 2981936 - 2983585 | 60206.2 |
| shikimate kinase i | JCM19237_4930 | Not Available | Positive | 2983796 - 2984314 | 19421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
