Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | JCM19237_4861 | Not Available | Negative | 2928558 - 2930099 | 55375.4 |
| rhodanese-related sulfurtransferase | JCM19237_4862 | Not Available | Positive | 2930528 - 2930974 | 16300.7 |
| protein export cytoplasm chaperone protein | JCM19237_4863 | Not Available | Positive | 2931106 - 2931579 | 17584.8 |
| glycerol-3-phosphate dehydrogenase | JCM19237_4864 | Not Available | Positive | 2931681 - 2932697 | 35949.2 |
| serine acetyltransferase | JCM19237_4865 | Not Available | Positive | 2932901 - 2933698 | 28355.3 |
| trna (cytidine(34)-2'-o)-methyltransferase | JCM19237_4866 | Not Available | Negative | 2933890 - 2934354 | 17253.8 |
| diguanylate cyclase | JCM19237_4867 | Not Available | Positive | 2934586 - 2936208 | 61416.4 |
| copper sensory histidine kinase cpxa | JCM19237_4868 | Not Available | Negative | 2936251 - 2937612 | 51331.8 |
| copper-sensing two-component system response regulator cpxr | JCM19237_4869 | Not Available | Negative | 2937612 - 2938304 | 25939.6 |
| p pilus assembly/cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein | JCM19237_4870 | Not Available | Positive | 2938517 - 2938975 | 17140.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
