Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | JCM19237_4811 | Not Available | Negative | 2898476 - 2899441 | 35795.5 |
| trna (guanosine(18)-2'-o)-methyltransferase | JCM19237_4812 | Not Available | Negative | 2899453 - 2899659 | 7986.68 |
| trna (guanosine(18)-2'-o)-methyltransferase | JCM19237_4813 | Not Available | Negative | 2899698 - 2900165 | 16751.2 |
| gtp pyrophosphokinase (p)ppgpp synthetase ii | JCM19237_4814 | Not Available | Negative | 2900272 - 2901945 | 62775.9 |
| gtp pyrophosphokinase (p)ppgpp synthetase ii | JCM19237_4815 | Not Available | Negative | 2901977 - 2902372 | 15004.0 |
| dna-directed rna polymerase omega subunit | JCM19237_4816 | Not Available | Negative | 2902391 - 2902669 | 10285.2 |
| guanylate kinase | JCM19237_4817 | Not Available | Negative | 2902721 - 2903323 | 22847.9 |
| hypothetical protein | JCM19237_4818 | Not Available | Positive | 2903682 - 2903795 | 4353.2 |
| hypothetical protein | JCM19237_4819 | Not Available | Positive | 2903913 - 2904233 | 12385.8 |
| protein yicc | JCM19237_4820 | Not Available | Negative | 2904321 - 2904839 | 19552.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
