Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase polypeptide i | JCM19237_4781 | Not Available | Positive | 2878089 - 2878994 | 33269.4 |
| cytochrome c oxidase polypeptide i | JCM19237_4782 | Not Available | Positive | 2878952 - 2879137 | 6462.83 |
| cytochrome oxidase biogenesis protein cox11-ctag | JCM19237_4783 | Not Available | Positive | 2879146 - 2879724 | 20862.8 |
| cytochrome c oxidase polypeptide iii | JCM19237_4784 | Not Available | Positive | 2879731 - 2880024 | 10604.0 |
| cytochrome c oxidase polypeptide iii | JCM19237_4785 | Not Available | Positive | 2879997 - 2880635 | 24073.7 |
| hypothetical protein | JCM19237_4786 | Not Available | Negative | 2880737 - 2880943 | 7690.05 |
| cytochrome oxidase biogenesis protein surf1 | JCM19237_4787 | Not Available | Positive | 2881029 - 2881706 | 25818.5 |
| hypotehtical protein in cytochrome oxidase biogenesis cluster | JCM19237_4788 | Not Available | Positive | 2881703 - 2882248 | 19775.5 |
| heme a synthase | JCM19237_4789 | Not Available | Positive | 2882577 - 2883329 | 27189.1 |
| hypothetical protein | JCM19237_4790 | Not Available | Negative | 2883312 - 2883455 | 5185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
