Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5243 | Not Available | Positive | 235630 - 235752 | 4879.0 |
| hypothetical protein | JCM19237_5244 | Not Available | Negative | 235732 - 235845 | 4207.13 |
| transcriptional regulator | JCM19237_5245 | Not Available | Negative | 235842 - 236606 | 28071.7 |
| isochorismatase | JCM19237_5246 | Not Available | Positive | 236736 - 237107 | 13782.9 |
| s-(hydroxymethyl)glutathione dehydrogenase | JCM19237_5247 | Not Available | Negative | 237287 - 238435 | 40753.4 |
| abc-type hemin transport system atpase component | JCM19237_5248 | Not Available | Negative | 238910 - 239674 | 27215.8 |
| hemin abc transporter permease protein | JCM19237_5249 | Not Available | Negative | 239709 - 240359 | 22358.1 |
| hemin abc transporter permease protein | JCM19237_5250 | Not Available | Negative | 240356 - 240592 | 7971.02 |
| hypothetical protein | JCM19237_5251 | Not Available | Negative | 240589 - 240714 | 4485.02 |
| periplasmic hemin-binding protein | JCM19237_5252 | Not Available | Negative | 240742 - 241662 | 32147.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
