Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | JCM19237_681 | Not Available | Negative | 2787842 - 2788927 | 39045.4 |
| ribosomal large subunit pseudouridine synthase f | JCM19237_682 | Not Available | Negative | 2789230 - 2790435 | 46276.5 |
| rnd multidrug efflux transporter | JCM19237_683 | Not Available | Negative | 2790610 - 2792136 | 55431.4 |
| rnd multidrug efflux transporter | JCM19237_684 | Not Available | Negative | 2792142 - 2793731 | 57830.3 |
| membrane fusion protein of rnd family multidrug efflux pump | JCM19237_685 | Not Available | Negative | 2793731 - 2793871 | 4872.88 |
| membrane fusion protein of rnd family multidrug efflux pump | JCM19237_686 | Not Available | Negative | 2793868 - 2794827 | 34170.0 |
| Trna-tyr | Not Available | Not Available | Positive | 2795051 - 2795135 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2795248 - 2795332 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2795554 - 2795630 | Not Available |
| crcb protein | JCM19237_4670 | Not Available | Negative | 2795739 - 2796122 | 13490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
