Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export membrane protein secf | JCM19237_5223 | Not Available | Positive | 220553 - 221119 | 20103.7 |
| cystathionine beta-lyase | JCM19237_5224 | Not Available | Positive | 221271 - 222299 | 37693.2 |
| cystathionine beta-lyase | JCM19237_5225 | Not Available | Positive | 222278 - 222403 | 4627.81 |
| metal-dependent phosphohydrolase | JCM19237_5226 | Not Available | Negative | 222591 - 223286 | 25131.6 |
| hypothetical protein | JCM19237_5227 | Not Available | Positive | 223362 - 223739 | 14040.2 |
| dna-3-methyladenine glycosylase | JCM19237_5228 | Not Available | Positive | 224530 - 225150 | 23681.0 |
| cobalt-zinc-cadmium resistance protein | JCM19237_5229 | Not Available | Positive | 225264 - 226202 | 34060.0 |
| methyl-accepting chemotaxis protein | JCM19237_5230 | Not Available | Positive | 226401 - 226586 | 6990.88 |
| methyl-accepting chemotaxis protein | JCM19237_5231 | Not Available | Positive | 226550 - 227005 | 16855.3 |
| methyl-accepting chemotaxis protein | JCM19237_5232 | Not Available | Positive | 226990 - 227523 | 19900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
