Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase ybff | JCM19237_551 | Not Available | Positive | 2685737 - 2685904 | 6364.57 |
| hypothetical protein | JCM19237_552 | Not Available | Positive | 2685980 - 2686324 | 13485.7 |
| flavodoxin 1 | JCM19237_553 | Not Available | Positive | 2686428 - 2686895 | 17670.6 |
| ferric uptake regulation protein fur | JCM19237_554 | Not Available | Positive | 2687349 - 2687795 | 16878.1 |
| glutaminyl-trna synthetase | JCM19237_555 | Not Available | Negative | 2687914 - 2688636 | 27020.9 |
| glutaminyl-trna synthetase | JCM19237_556 | Not Available | Negative | 2688633 - 2689580 | 36382.2 |
| beta-hexosaminidase | JCM19237_557 | Not Available | Negative | 2689825 - 2691597 | 65749.0 |
| beta-hexosaminidase | JCM19237_558 | Not Available | Negative | 2691600 - 2692508 | 32791.8 |
| pts system n-acetylglucosamine-specific iia / iib / iic component | JCM19237_559 | Not Available | Negative | 2692763 - 2694253 | 52728.0 |
| glucosamine-6-phosphate deaminase | JCM19237_560 | Not Available | Positive | 2694510 - 2695310 | 29964.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
