Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase amidotransferase subunit | JCM19237_481 | Not Available | Positive | 2636020 - 2636643 | 22527.3 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | JCM19237_482 | Not Available | Positive | 2636657 - 2637139 | 17344.6 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | JCM19237_483 | Not Available | Positive | 2637244 - 2637390 | 4912.83 |
| imidazole glycerol phosphate synthase cyclase subunit | JCM19237_484 | Not Available | Positive | 2637459 - 2638172 | 26115.0 |
| phosphoribosyl-amp cyclohydrolase | JCM19237_485 | Not Available | Positive | 2638169 - 2638780 | 22029.3 |
| thymidine kinase | JCM19237_486 | Not Available | Negative | 2638915 - 2639493 | 21753.0 |
| na+/h+ antiporter | JCM19237_487 | Not Available | Negative | 2639669 - 2640139 | 16121.9 |
| na+/h+ antiporter | JCM19237_488 | Not Available | Negative | 2640136 - 2641137 | 35981.2 |
| dna-binding protein h-ns | JCM19237_489 | Not Available | Positive | 2641891 - 2642286 | 14912.8 |
| membrane-bound lytic murein transglycosylase b | JCM19237_490 | Not Available | Negative | 2642618 - 2642851 | 8964.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
