Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | JCM19237_461 | Not Available | Negative | 2619523 - 2621679 | 77625.0 |
| alcohol dehydrogenase | JCM19237_462 | Not Available | Negative | 2621697 - 2622221 | 18963.9 |
| putative membrane protein | JCM19237_463 | Not Available | Positive | 2623083 - 2623571 | 16972.4 |
| possible potassium channel vic family | JCM19237_464 | Not Available | Positive | 2623810 - 2624292 | 18595.3 |
| possible potassium channel vic family | JCM19237_465 | Not Available | Positive | 2624289 - 2624627 | 12159.8 |
| cysteinyl-trna synthetase | JCM19237_466 | Not Available | Negative | 2624745 - 2626127 | 51666.0 |
| peptidyl-prolyl cis-trans isomerase ppib | JCM19237_467 | Not Available | Positive | 2626466 - 2626963 | 18323.7 |
| udp-2,3-diacylglucosamine diphosphatase | JCM19237_468 | Not Available | Positive | 2627338 - 2627745 | 15502.6 |
| integral membrane protein | JCM19237_469 | Not Available | Negative | 2628073 - 2628741 | 23620.2 |
| predicted signal transduction protein | JCM19237_470 | Not Available | Positive | 2628995 - 2629192 | 7208.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
