Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine-5-oxyacetic acid methyl ester) 34 synthase | JCM19237_451 | Not Available | Positive | 2611242 - 2611970 | 27401.8 |
| trna (5-methoxyuridine) 34 synthase | JCM19237_452 | Not Available | Positive | 2611985 - 2612758 | 29756.9 |
| trna (5-methoxyuridine) 34 synthase | JCM19237_453 | Not Available | Positive | 2612782 - 2612958 | 6536.6 |
| hypothetical protein | JCM19237_454 | Not Available | Positive | 2613045 - 2613818 | 29007.7 |
| hypothetical protein | JCM19237_455 | Not Available | Positive | 2613843 - 2615348 | 55641.3 |
| alpha-l-glutamate ligase family protein | JCM19237_456 | Not Available | Positive | 2615350 - 2615649 | 11289.8 |
| alpha-l-glutamate ligase family protein | JCM19237_457 | Not Available | Positive | 2615646 - 2616326 | 24557.7 |
| type ii cystathionine beta-lyase | JCM19237_458 | Not Available | Positive | 2616453 - 2617712 | 47158.4 |
| potential qued like 2 | JCM19237_459 | Not Available | Positive | 2617723 - 2618229 | 18558.1 |
| sorbitol-6-phosphate 2-dehydrogenase | JCM19237_460 | Not Available | Positive | 2618568 - 2619254 | 24606.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
