Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | JCM19237_431 | Not Available | Negative | 2589854 - 2590990 | 41809.4 |
| cytochrome d ubiquinol oxidase subunit i | JCM19237_432 | Not Available | Negative | 2591008 - 2592594 | 58594.7 |
| putative sugar isomerase | JCM19237_433 | Not Available | Negative | 2593609 - 2594076 | 17096.3 |
| predicted sialic acid transporter | JCM19237_434 | Not Available | Negative | 2594186 - 2595679 | 54484.2 |
| n-acetylmannosamine kinase | JCM19237_435 | Not Available | Negative | 2595774 - 2595980 | 7046.61 |
| n-acetylmannosamine kinase | JCM19237_436 | Not Available | Negative | 2595974 - 2596438 | 15902.3 |
| n-acetylmannosamine-6-phosphate 2-epimerase | JCM19237_437 | Not Available | Negative | 2596607 - 2597317 | 24702.6 |
| sialic acid utilization regulator rpir family | JCM19237_438 | Not Available | Negative | 2597760 - 2598404 | 23175.6 |
| sialic acid utilization regulator rpir family | JCM19237_439 | Not Available | Negative | 2598388 - 2598636 | 8736.7 |
| n-acetylneuraminate lyase | JCM19237_440 | Not Available | Positive | 2598947 - 2599843 | 31899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
