Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(glcnac)2 abc transporter atp-binding component 2JCM19237_3677Not AvailableNegative2557845 - 255863329261.6
(glcnac)2 abc transporter atp-binding component 1JCM19237_3678Not AvailableNegative2558630 - 255933126266.1
(glcnac)2 abc transporter atp-binding component 1JCM19237_3679Not AvailableNegative2559310 - 255961510810.2
(glcnac)2 abc transporter permease component 2JCM19237_3680Not AvailableNegative2559615 - 256063436484.0
(glcnac)2 abc transporter permease component 1JCM19237_3681Not AvailableNegative2560636 - 256162236736.6
(glcnac)2 abc transporter periplasmic substrate-binding proteinJCM19237_3682Not AvailableNegative2561733 - 256201110711.7
(glcnac)2 abc transporter periplasmic substrate-binding proteinJCM19237_3683Not AvailableNegative2561972 - 256339953592.2
hypothetical proteinJCM19237_3684Not AvailableNegative2564082 - 25642375613.54
probable protease htpx homologJCM19237_3685Not AvailablePositive2564558 - 256542131283.2
methyl-accepting chemotaxis proteinJCM19237_3686Not AvailablePositive2565802 - 256649726148.4

Displaying genes 3311 – 3320 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.