Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3647 | Not Available | Negative | 2535587 - 2536711 | 43117.6 |
| polysaccharide deacetylase | JCM19237_3648 | Not Available | Negative | 2536857 - 2537336 | 17941.0 |
| hypothetical protein | JCM19237_3649 | Not Available | Negative | 2537357 - 2537521 | 6051.06 |
| sugar transferase | JCM19237_3650 | Not Available | Negative | 2537526 - 2538590 | 40727.9 |
| polysaccharide export protein | JCM19237_3651 | Not Available | Positive | 2539222 - 2539422 | 7067.37 |
| polysaccharide export protein | JCM19237_3652 | Not Available | Positive | 2539455 - 2539772 | 11652.1 |
| lipopolysaccharide biosynthesis chain length determinant protein | JCM19237_3653 | Not Available | Positive | 2539800 - 2541341 | 58427.2 |
| protein-tyrosine kinase | JCM19237_3654 | Not Available | Positive | 2541338 - 2542357 | 36213.3 |
| glycine-rich cell wall structural protein precursor | JCM19237_3655 | Not Available | Positive | 2542377 - 2542931 | 19545.3 |
| hypothetical protein | JCM19237_3656 | Not Available | Positive | 2542915 - 2543145 | 9012.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
