Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable thiol oxidoreductase | JCM19237_3577 | Not Available | Positive | 2478695 - 2479759 | 38316.5 |
| iron-regulated protein a precursor | JCM19237_3578 | Not Available | Positive | 2479922 - 2480863 | 34785.6 |
| putative exported protein | JCM19237_3579 | Not Available | Positive | 2480905 - 2481990 | 39470.9 |
| l,d-transpeptidase ycbb | JCM19237_3580 | Not Available | Positive | 2482269 - 2482895 | 24183.6 |
| l,d-transpeptidase ycbb | JCM19237_3581 | Not Available | Positive | 2482892 - 2483779 | 33949.1 |
| exported protein | JCM19237_3582 | Not Available | Positive | 2484039 - 2484596 | 20802.0 |
| hypothetical metal-binding enzyme ycbl homolog | JCM19237_3583 | Not Available | Positive | 2484737 - 2485390 | 23682.3 |
| hypothetical protein | JCM19237_3584 | Not Available | Negative | 2485474 - 2485695 | 8378.67 |
| o-antigen acetylase | JCM19237_3585 | Not Available | Negative | 2485823 - 2487193 | 52447.2 |
| o-antigen acetylase | JCM19237_3586 | Not Available | Negative | 2487145 - 2487441 | 11213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
