Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sensory box sensor histidine kinase/response regulator | JCM19237_5193 | Not Available | Negative | 193004 - 194488 | 55328.7 |
| hlyd family secretion protein | JCM19237_5194 | Not Available | Negative | 194509 - 195846 | 50716.6 |
| hpt domain containing protein | JCM19237_5195 | Not Available | Negative | 195914 - 196222 | 11385.9 |
| hypothetical protein | JCM19237_5196 | Not Available | Positive | 196832 - 197179 | 11302.1 |
| t1ss secreted agglutinin rtx | JCM19237_5197 | Not Available | Positive | 197170 - 198651 | 52222.3 |
| t1ss secreted agglutinin rtx | JCM19237_5198 | Not Available | Positive | 198606 - 200108 | 53289.4 |
| t1ss secreted agglutinin rtx | JCM19237_5199 | Not Available | Positive | 200069 - 200308 | 8367.73 |
| t1ss secreted agglutinin rtx | JCM19237_5200 | Not Available | Positive | 200302 - 201984 | 59704.8 |
| t1ss secreted agglutinin rtx | JCM19237_5201 | Not Available | Positive | 202014 - 203333 | 46010.9 |
| conserved domain protein | JCM19237_5202 | Not Available | Negative | 203508 - 203735 | 8904.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
