Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane protein | JCM19237_3477 | Not Available | Negative | 2397580 - 2397759 | 6817.76 |
| outer membrane protein ompu | JCM19237_3478 | Not Available | Negative | 2397756 - 2398502 | 26754.8 |
| iron-containing alcohol dehydrogenase | JCM19237_3479 | Not Available | Positive | 2398765 - 2399961 | 42618.7 |
| atpase | JCM19237_3480 | Not Available | Positive | 2400287 - 2400970 | 26237.0 |
| atpase | JCM19237_3481 | Not Available | Positive | 2401081 - 2401593 | 18051.9 |
| hypothetical protein | JCM19237_3482 | Not Available | Positive | 2402017 - 2402604 | 20977.3 |
| adp-ribosylglycohydrolase | JCM19237_3483 | Not Available | Positive | 2402788 - 2403756 | 34857.3 |
| l-serine dehydratase beta and alpha subunit | JCM19237_3484 | Not Available | Negative | 2403865 - 2404128 | 9372.51 |
| l-serine dehydratase beta and alpha subunit | JCM19237_3485 | Not Available | Negative | 2404304 - 2405224 | 33603.1 |
| serine transporter | JCM19237_3486 | Not Available | Negative | 2405459 - 2406712 | 44685.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
