Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3467 | Not Available | Negative | 2386891 - 2387298 | 14872.4 |
| predicted transcriptional regulator for fatty acid degradation fadq tetr family | JCM19237_3468 | Not Available | Positive | 2388384 - 2389046 | 24345.3 |
| acyl-coa dehydrogenase short-chain specific | JCM19237_3469 | Not Available | Positive | 2389115 - 2389906 | 29009.6 |
| acyl-coa dehydrogenase short-chain specific | JCM19237_3470 | Not Available | Positive | 2389927 - 2391408 | 53456.9 |
| short-chain alcohol dehydrogenase family | JCM19237_3471 | Not Available | Positive | 2391604 - 2392770 | 42477.5 |
| sensor protein phoq | JCM19237_3472 | Not Available | Negative | 2392937 - 2394229 | 48426.1 |
| transcriptional regulatory protein phop | JCM19237_3473 | Not Available | Negative | 2394280 - 2394921 | 24166.1 |
| trka potassium channel-family protein | JCM19237_3474 | Not Available | Negative | 2395162 - 2395914 | 26521.3 |
| trka potassium channel-family protein | JCM19237_3475 | Not Available | Negative | 2395908 - 2396843 | 32903.9 |
| glutaredoxin 1 | JCM19237_3476 | Not Available | Negative | 2396949 - 2397311 | 14001.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
