Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase e | JCM19237_3447 | Not Available | Negative | 2370736 - 2371305 | 21445.9 |
| isocitrate dehydrogenase | JCM19237_3448 | Not Available | Positive | 2371511 - 2372764 | 45556.6 |
| cold shock protein cspd | JCM19237_3449 | Not Available | Negative | 2373106 - 2373306 | 7150.37 |
| atp-dependent clp protease adaptor protein clps | JCM19237_3450 | Not Available | Positive | 2373789 - 2374052 | 10060.1 |
| atp-dependent clp protease atp-binding subunit clpa | JCM19237_3451 | Not Available | Positive | 2374157 - 2374726 | 20906.3 |
| atp-dependent clp protease atp-binding subunit clpa | JCM19237_3452 | Not Available | Positive | 2374756 - 2375661 | 33214.4 |
| atp-dependent clp protease atp-binding subunit clpa | JCM19237_3453 | Not Available | Positive | 2375639 - 2376418 | 28910.9 |
| agmatinase | JCM19237_3454 | Not Available | Negative | 2376540 - 2377454 | 33160.3 |
| biosynthetic arginine decarboxylase | JCM19237_3455 | Not Available | Negative | 2377560 - 2378564 | 38358.2 |
| biosynthetic arginine decarboxylase | JCM19237_3456 | Not Available | Negative | 2378561 - 2378686 | 4177.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
