Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system permease protein oppc | JCM19237_3437 | Not Available | Positive | 2362690 - 2363046 | 13405.3 |
| oligopeptide transport system permease protein oppc | JCM19237_3438 | Not Available | Positive | 2363034 - 2363603 | 21000.3 |
| oligopeptide transport system permease protein oppb | JCM19237_3439 | Not Available | Positive | 2363695 - 2364453 | 28078.5 |
| oligopeptide transport atp-binding protein oppd | JCM19237_3440 | Not Available | Positive | 2364468 - 2364659 | 6985.32 |
| oligopeptide transport atp-binding protein oppf | JCM19237_3441 | Not Available | Positive | 2364659 - 2365636 | 36149.7 |
| hypothetical protein | JCM19237_3442 | Not Available | Negative | 2365922 - 2367010 | 41289.9 |
| adenylosuccinate lyase | JCM19237_3443 | Not Available | Negative | 2367193 - 2368560 | 51159.0 |
| hypothetical protein | JCM19237_3444 | Not Available | Negative | 2368664 - 2369278 | 22692.6 |
| pp_03003 | JCM19237_3445 | Not Available | Negative | 2369322 - 2369711 | Not Available |
| pp_03004 | JCM19237_3446 | Not Available | Negative | 2369834 - 2370406 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
