Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4410 | Not Available | Negative | 2353981 - 2354274 | 10962.0 |
| branched-chain amino acid transport system carrier protein | JCM19237_4411 | Not Available | Negative | 2354661 - 2355968 | 46445.3 |
| hypothetical protein | JCM19237_4412 | Not Available | Negative | 2356469 - 2356669 | 6979.68 |
| 2-dehydro-3-deoxygluconate kinase | JCM19237_4413 | Not Available | Positive | 2357213 - 2358004 | 29026.6 |
| predicted transcriptional regulator liur of leucine degradation pathway merr family | JCM19237_3431 | Not Available | Negative | 2358283 - 2358681 | 15573.8 |
| hypothetical protein | JCM19237_3432 | Not Available | Positive | 2359397 - 2359573 | 6709.81 |
| oligopeptide abc transporter | JCM19237_3433 | Not Available | Positive | 2360015 - 2360521 | 18750.3 |
| oligopeptide abc transporter | JCM19237_3434 | Not Available | Positive | 2360497 - 2360724 | 8532.35 |
| oligopeptide abc transporter | JCM19237_3435 | Not Available | Positive | 2360756 - 2361637 | 33137.3 |
| oligopeptide transport system permease protein oppb | JCM19237_3436 | Not Available | Positive | 2361757 - 2362677 | 33627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
